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broadinstitute / viral-ngs / 5775
23%

Build:
DEFAULT BRANCH: master
Ran 23 Mar 2018 08:02PM UTC
Jobs 2
Files 45
Run time 6min
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pass sample name in WDL call to plot_coverage (#799)

* pass sample name in WDL call to plot_coverage

pass sample name in WDL call to plot_coverage so the same name shows up in the coverage plot PDF

* pass sample name in second WDL call to plot_coverage

within refine_2x_and_plot

6156 of 8650 relevant lines covered (71.17%)

0.94 hits per line

Jobs
ID Job ID Ran Files Coverage
5 5775.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]) 23 Mar 2018 08:09PM UTC 0
71.11
Travis Job 5775.5
6 5775.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]) 23 Mar 2018 08:02PM UTC 0
33.88
Travis Job 5775.6
Source Files on build 5775
Detailed source file information is not available for this build.
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