SUNCAT-Center / CatKit / 58

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Reconfiguration of adsorption site enumeration into AdsorptionSite class and transition to Gratoms object. (#14)

* Change the wway unique sites are identified so that an array of mathcing sites is returned

* further documentation cahnges / make periodic reduction of sites optional

* Fingerprint databasing tweaks and documentation changes

* [INCOMPLETE] heavy modifications to the surface and adsoprtion modules for gratoms integration and  bidentate adsorption

* formatting changes / some obtuse angle handling changes in adsorption site generator

* yapf formatting

* usage changes for adsorption site enumeration and graph construction for slabs from bulk

* documentation and testing updates

* travis update

* reintroduce hash

* minor revisions

* python 2 compatability

* revert pathways changes for Networkx v2.1 / tests for all pathway enumerations

* yapf

* add coverage ignore lines

603 of 603 new or added lines in 12 files covered. (100.0%)

1158 of 1913 relevant lines covered (60.53%)

1.81 hits per line