bigdatagenomics / adam / 2718
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 49s
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2718

Pull #1948

jenkins

web-flow 
Merge 72833b614 into 9ea870c8b
Pull Request #1948: Implement Hive-style partitioning by genomic range of Parquet backed datasets

89 of 89 new or added lines in 5 files covered. (100.0%)

6423 of 7778 relevant lines covered (82.58%)

3.39 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
84.78
 -3.31% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
3
61.47
 -1.27% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
69.95
 1.23% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
7
92.87
 0.09% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
84.78
 -3.31% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
96.88
 -3.13% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/smithwaterman/SmithWaterman.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
79.71
 0.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
71.15
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
89.61
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
82.7
 -0.27% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
94.62
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
2
74.07
 5.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
93.75
 -1.04% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
2
61.73
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
90.29
 2.91% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
84.4
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
59.46
 -5.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
2
87.91
 -2.2% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
3
95.51
 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
3
92.87
 0.09% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
3
63.64
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
4
61.47
 -1.27% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
Jobs
ID Job ID Ran Files Coverage
1 2718.1 142
82.58
2 2718.2 174
79.76
3 2718.3 142
82.58
4 2718.4 142
82.58
Source Files on build 2718
Coverage ∆ File Lines Relevant Covered Missed Hits/Line