bigdatagenomics / adam / 2700
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 10s
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2700

Pull #1940

jenkins

web-flow 
Merge 93b2510f7 into f6167848a
Pull Request #1940: [ADAM-1939] Allow validation stringency to waive off FLAG arrays.

9 of 9 new or added lines in 1 file covered. (100.0%)

6350 of 7694 relevant lines covered (82.53%)

3.3 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
79.58
 1.04% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
59.38
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
96.92
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
94.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
79.58
 1.04% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
95.83
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
89.61
 0.65% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
86.24
 2.75% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
96.23
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
92.31
 -1.28% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
86.67
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
62.74
 -0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
68.52
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
90.74
 -2.78% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
3
87.38
 -1.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
63.64
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
10
92.77
 -0.9% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2700.1 142
82.53
2 2700.2 142
82.53
3 2700.3 142
82.53
4 2700.4 142
82.53
Source Files on build 2700
Coverage ∆ File Lines Relevant Covered Missed Hits/Line