bigdatagenomics / adam / 2693
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 1min
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2693

Pull #1935

jenkins

web-flow 
Merge 0e09c6b4e into 824844739
Pull Request #1935: Ignore VCF INFO fields with number=G when stringency=LENIENT

14 of 14 new or added lines in 1 file covered. (100.0%)

6345 of 7677 relevant lines covered (82.65%)

3.31 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
5
78.55
 -0.45% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
62.5
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
63.21
 1.42% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
85.71
 -2.38% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
93.02
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
86.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
90.29
 1.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
64.0
 -4.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
82.97
 -0.27% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
98.11
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
84.13
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
98.52
 -0.37% adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala
2
66.67
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
93.75
 -1.04% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
2
69.23
 -3.85% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
59.26
 -2.47% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
3
94.38
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
3
78.55
 -0.45% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
5
63.64
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
6
93.55
 -0.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2693.1 142
82.65
2 2693.2 142
82.65
3 2693.3 142
82.65
4 2693.4 142
82.65
Source Files on build 2693
Coverage ∆ File Lines Relevant Covered Missed Hits/Line