bigdatagenomics / adam / 3402

DEFAULT BRANCH: master
Ran
Jobs 2
Files 142
Run time 2min
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heuermh 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/1cf45b4f4b3a0f54777840bda6d23d2a393b7afc">1cf45b4f4<a href="https://github.com/bigdatagenomics/adam/commit/1cf45b4f4b3a0f54777840bda6d23d2a393b7afc">&quot;&gt;Revert &amp;quot;feat: speed up 2bit file extract&quot;

This reverts commit </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/1eed8e8e464f8f92a6e87afc1d334e751423e810">1eed8e8e4</a>">1eed8e8e4</a><a href="https://github.com/bigdatagenomics/adam/commit/1cf45b4f4b3a0f54777840bda6d23d2a393b7afc">.

9 of 9 new or added lines in 1 file covered. (100.0%)

6326 of 7658 relevant lines covered (82.61%)

1.65 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/algorithms/smithwaterman/SmithWaterman.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
4
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 3402.1 0
82.61
2 3402.2 0
82.61
Source Files on build 3402
Detailed source file information is not available for this build.