bigdatagenomics / adam / 2687
82%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 1min
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2687

Pull #1930

jenkins

web-flow 
Merge fca816a28 into c691356a7
Pull Request #1930: [ADAM-1840] Support adding VCF header lines from Python.

16 of 16 new or added lines in 1 file covered. (100.0%)

6331 of 7680 relevant lines covered (82.43%)

3.3 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
14
68.98
 -2.52% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
59.38
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
68.52
 3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
96.63
 2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
78.75
 0.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
93.75
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.61
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
90.29
 1.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
64.0
 -4.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
94.62
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
62.74
 -0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
93.02
 -2.33% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
60.49
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
91.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
93.94
 0.65% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
82.43
 -0.54% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
2
96.23
 -3.77% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
3
83.49
 -2.75% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
6
61.04
 -5.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
Jobs
ID Job ID Ran Files Coverage
1 2687.1 142
82.43
2 2687.2 142
82.43
3 2687.3 142
82.43
4 2687.4 142
82.43
Source Files on build 2687
Coverage ∆ File Lines Relevant Covered Missed Hits/Line