bigdatagenomics / adam / 3380

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Jobs 2
Files 142
Run time 11s
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jenkins

fnothaft 
[ADAM-1909] Refactor pipe cmd parameter from String to Seq[String].

Refactor pipe cmd parameter from String to Seq[String]. Resolves #1909.

6334 of 7670 relevant lines covered (82.58%)

1.65 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
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 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
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 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
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 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
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 adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
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 adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
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 adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
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 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
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 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
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 adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
2
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 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
2
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 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
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 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
6
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 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
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 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
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 adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 3380.1 0
82.58
2 3380.2 0
82.58
Source Files on build 3380
Detailed source file information is not available for this build.