bigdatagenomics / adam / 2663
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 59s
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2663

Pull #1911

jenkins

web-flow 
Merge 137ac724a into 638fd2e51
Pull Request #1911: hive-style partitioning of parquet files by genomic position

52 of 52 new or added lines in 8 files covered. (100.0%)

6365 of 7707 relevant lines covered (82.59%)

3.3 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
88.16
 -0.58% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
1
87.69
 -1.37% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
1
82.21
 -1.03% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
91.07
 -1.66% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
1
90.0
 -1.84% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
2
76.85
 -1.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
4
74.25
 1.44% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
9
92.45
 -0.84% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
65.63
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
62.26
 0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
91.67
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
94.19
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
95.51
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
78.88
 0.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
88.96
 -0.65% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
84.4
 0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
66.23
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
94.62
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
68.52
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
61.73
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
3
82.21
 -1.03% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
5
85.44
 -4.85% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
7
92.45
 -0.84% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2663.1 142
82.59
2 2663.2 142
82.59
3 2663.3 142
82.59
4 2663.4 142
82.59
Source Files on build 2663
Coverage ∆ File Lines Relevant Covered Missed Hits/Line