bigdatagenomics / cannoli / 102
23%
master: 0%

LAST BUILD BRANCH: adam-0.33.0
DEFAULT BRANCH: master
Ran
Jobs 1
Files 14
Run time 5s
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
102

Pull #69

jenkins

web-flow 
Merge f4c14da72 into 276be85d0
Pull Request #69: [CANNOLI-104] Provide functions for use in cannoli-shell or notebooks.

180 of 180 new or added lines in 9 files covered. (100.0%)

127 of 447 relevant lines covered (28.41%)

0.28 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
14
5.88
 -1.01% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bedtools.scala
17
7.14
 -1.19% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bcftools.scala
17
7.14
 -1.19% cli/src/main/scala/org/bdgenomics/cannoli/cli/SnpEff.scala
17
7.14
 -1.55% cli/src/main/scala/org/bdgenomics/cannoli/cli/Vt.scala
19
7.14
 -1.55% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bowtie.scala
19
7.14
 -1.55% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bowtie2.scala
19
7.14
 -1.19% cli/src/main/scala/org/bdgenomics/cannoli/cli/Samtools.scala
20
6.45
 -0.96% cli/src/main/scala/org/bdgenomics/cannoli/cli/Freebayes.scala
28
3.23
 -0.35% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bwa.scala

Uncovered Existing Lines

Lines Coverage ∆ File
2
5.88
 -1.01% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bedtools.scala
2
7.14
 -1.55% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bowtie2.scala
2
7.14
 -1.55% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bowtie.scala
2
93.51
 -1.3% cli/src/main/scala/org/bdgenomics/cannoli/cli/InterleaveFastq.scala
2
7.14
 -1.19% cli/src/main/scala/org/bdgenomics/cannoli/cli/Samtools.scala
4
3.23
 -0.35% cli/src/main/scala/org/bdgenomics/cannoli/cli/Bwa.scala
Jobs
ID Job ID Ran Files Coverage
1 102.1 14
28.41
Source Files on build 102
Coverage ∆ File Lines Relevant Covered Missed Hits/Line