broadinstitute / viral-ngs / 5521
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DEFAULT BRANCH: master
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Jobs 2
Files 45
Run time 246min
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Merge pull request #781 from broadinstitute/dp-bmtagger

WDL: provide bmtagger more RAM and parallelize krona

6105 of 8631 relevant lines covered (70.73%)

0.93 hits per line

Jobs
ID Job ID Ran Files Coverage
5 5521.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]) 0
70.68
 Travis Job 5521.5
6 5521.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]) 0
33.82
 Travis Job 5521.6
Source Files on build 5521
Detailed source file information is not available for this build.