bigdatagenomics / adam / 3335

DEFAULT BRANCH: master
Ran
Jobs 2
Files 142
Run time 15s
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3335

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jenkins

fnothaft 
updated ReferenceRegion in python

6 of 6 new or added lines in 2 files covered. (100.0%)

6316 of 7645 relevant lines covered (82.62%)

1.65 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
89.61
 -1.24% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
5
72.8
 -1.05% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
96.92
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
78.7
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
63.46
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
60.49
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
89.61
 -1.24% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
93.33
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
84.4
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
90.0
 -1.43% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
2
88.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
82.43
 -0.81% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
8
92.37
 -0.39% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 3335.1 142
82.62
2 3335.2 142
82.62
Source Files on build 3335
Coverage ∆ File Lines Relevant Covered Missed Hits/Line