broadinstitute / viral-ngs / 5463
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Merge pull request #771 from broadinstitute/ct-pass-jvmmemory

pass JVMmemory to SamToFastqTool().per_read_group() call in rmdup_mvicuna_bam()

1 of 1 new or added line in 1 file covered. (100.0%)

6093 of 8600 relevant lines covered (70.85%)

0.94 hits per line

Jobs
ID Job ID Ran Files Coverage
5 5463.5 (TRAVIS_JOB=test_py36 PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]) 0
70.79
 Travis Job 5463.5
6 5463.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]) 0
33.88
 Travis Job 5463.6
Source Files on build 5463
Detailed source file information is not available for this build.