755
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Ran 25 Jan 2018 03:11AM UTC

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Files 97

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Build # 755

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travis-ci

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web-flow

Commit Message

networkx/pydot support for reading .dot files (#335)

* networkx/pydot support for reading .dot files

This PR replaces pygraphviz support with pydot as an
 for reading .dot (graphviz) files. pygraphviz support on
Windows on recent versions of Python is patchy at best. pydot is
easier to install and provides an alternative.

When dot file reading is required (kappa interface), the results are
now returned in the (more flexible and maintained) networkx format.
The dot file itself can be read using the pysb.util.read_dot() 
function.

This change also allows us to move appveyor onto Python 3.6 -
pygraphviz was the hurdle that was previously preventing this.

* Update doctests to numpy 1.14 standards

* Update appveyor to use conda-forge, like travis

* Drop pygraphviz as a requirement

Coverage Stats

6329 of 8429 relevant lines covered (75.09%)

1.49 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	755.1	25 Jan 2018 03:13AM UTC	0	74.61	Travis Job 755.1
2	755.2	25 Jan 2018 03:11AM UTC	0	73.91	Travis Job 755.2

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