bigdatagenomics / adam / 2597
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 3
Files 142
Run time 130min
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2597

Pull #1881

jenkins

web-flow 
Merge bca5018ef into c5b4ebca1
Pull Request #1881: [ADAM-1875] Add ability to timeout a piped command.

18 of 18 new or added lines in 1 file covered. (100.0%)

6318 of 7639 relevant lines covered (82.71%)

2.48 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
9
61.54
 -28.46% adam-core/src/main/scala/org/bdgenomics/adam/rdd/OutFormatter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
83.24
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
62.16
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
62.74
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
65.63
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
98.46
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.27
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
95.83
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
64.0
 -4.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
2
60.49
 -2.47% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
88.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
63.46
 -1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
63.64
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
78.7
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
4
72.22
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
7
92.76
 -0.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2597.1 142
82.71
2 2597.2 142
82.71
3 2597.3 142
82.71
Source Files on build 2597
Coverage ∆ File Lines Relevant Covered Missed Hits/Line