bigdatagenomics / adam / 2578
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 26s
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2578

Pull #1878

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/00d5af77ec41a7b00b47b17c9ae35aa5f04af0c0">00d5af77e<a href="https://github.com/bigdatagenomics/adam/commit/00d5af77ec41a7b00b47b17c9ae35aa5f04af0c0">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/7cbe2f3f66ba4e0fa463790dec7661fc5d6da26b">7cbe2f3f6</a>">7cbe2f3f6</a><a href="https://github.com/bigdatagenomics/adam/commit/00d5af77ec41a7b00b47b17c9ae35aa5f04af0c0"> into 4223f56b3">4223f56b3</a>
Pull Request #1878: hive-style partitioning of parquet files by genomic position

59 of 59 new or added lines in 3 files covered. (100.0%)

6342 of 7678 relevant lines covered (82.6%)

3.3 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
5
74.72
 0.87% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
13
91.86
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
85.71
 -2.38% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
63.46
 -1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
59.46
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
96.23
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
61.73
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
95.83
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
98.46
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
84.4
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
86.67
 -13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
89.54
 -0.65% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
3
66.67
 -5.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
59.74
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
78.57
 -0.13% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
4
61.79
 -0.94% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
4
87.38
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
15
74.72
 0.87% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
36
91.86
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
58
82.43
 -0.54% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2578.1 142
82.6
2 2578.2 142
82.6
3 2578.3 142
82.6
4 2578.4 142
82.6
Source Files on build 2578
Coverage ∆ File Lines Relevant Covered Missed Hits/Line