bigdatagenomics / adam / 2555
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 4
Files 142
Run time 2min
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2555

Pull #1727

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/243b0b7f562a86d3d3f373019576daab8667c923">243b0b7f5<a href="https://github.com/bigdatagenomics/adam/commit/243b0b7f562a86d3d3f373019576daab8667c923">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/3a8c627af194969d01fbb92b46bbf7fc70452aac">3a8c627af</a>">3a8c627af</a><a href="https://github.com/bigdatagenomics/adam/commit/243b0b7f562a86d3d3f373019576daab8667c923"> into 71f9d131f">71f9d131f</a>
Pull Request #1727: Add optional accumulator for VCF header lines to VCFOutFormatter.

3 of 3 new or added lines in 1 file covered. (100.0%)

6308 of 7617 relevant lines covered (82.81%)

3.31 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
94.44
 -5.56% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VCFOutFormatter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
65.38
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
93.33
 6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
84.4
 0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
82.97
 -0.27% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
61.73
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
78.82
 0.13% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
96.92
 -3.08% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
2
93.02
 -2.33% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
89.32
 2.91% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
91.67
 -1.85% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
4
61.04
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
5
93.39
 -0.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2555.1 142
82.81
2 2555.2 142
82.81
3 2555.3 142
82.81
4 2555.4 142
82.81
Source Files on build 2555
Coverage ∆ File Lines Relevant Covered Missed Hits/Line