broadinstitute / gamgee / 1449

DEFAULT BRANCH: master
Ran
Jobs 1
Files 192
Run time 1min
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1449

Pull #385

travis-ci

kgururaj 
Check for missing variant in MultipleVariantIterator - important if one
of the inputs is a blank VCF
Pull Request #385: Fix for https://github.com/broadinstitute/foghorn/issues/149

4 of 4 new or added lines in 1 file covered. (100.0%)

2799 of 3199 relevant lines covered (87.5%)

922.16 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
100.0
 0.0% gamgee/gamgee.h
1
7.14
 -48.12% gamgee/variant_reader.h
2
95.56
 -4.44% gamgee/multiple_variant_iterator.cpp
2
11.11
 1.5% gamgee/sam.h
4
36.59
 -12.25% build/contrib/htslib/src/htslib/htslib/vcf.h
4
38.46
 -9.54% gamgee/individual_field_value.h
5
36.36
 -33.64% gamgee/individual_field.h
5
0.0
 -47.62% gamgee/utils/utils.h
6
16.67
 16.67% gamgee/exceptions.h
6
53.85
 -46.15% gamgee/variant_builder_multi_sample_vector.h
7
23.08
 23.08% gamgee/variant_header.h
8
55.56
 22.22% gamgee/fastq.h
11
62.07
 62.07% gamgee/sam_builder.h
26
0.0
 -100.0% gamgee/individual_field_value_iterator.h
Jobs
ID Job ID Ran Files Coverage
2 1449.2 192
87.5
 Travis Job 1449.2
Source Files on build 1449
Coverage ∆ File Lines Relevant Covered Missed Hits/Line