broadinstitute / gamgee / 1446

DEFAULT BRANCH: master
Ran
Jobs 1
Files 192
Run time 1min
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1446

Pull #376

travis-ci

kgururaj 
1. Created functions get_raw_merged_header() and get_merged_header() in
VariantHeaderMerger
2. Move constructor, = for VariantHeaderMerger - disable deep copy
constructor, =
Pull Request #376: Added LUT for merged header in MultipleVariantReader

222 of 222 new or added lines in 5 files covered. (100.0%)

2765 of 3143 relevant lines covered (87.97%)

1116.14 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
95.45
 gamgee/utils/merged_vcf_lut.cpp
6
6.67
 0.42% gamgee/multiple_variant_reader.h
8
87.88
 gamgee/variant_header_merger.cpp
45
2.17
 gamgee/utils/merged_vcf_lut.h
58
3.33
 gamgee/variant_header_merger.h

Uncovered Existing Lines

Lines Coverage ∆ File
1
40.0
 -10.0% gamgee/cigar.h
1
100.0
 0.0% gamgee/gamgee.h
1
71.43
 61.81% gamgee/sam.h
1
87.5
 67.5% gamgee/variant.h
1
0.0
 -55.26% gamgee/variant_reader.h
3
0.0
 0.0% gamgee/exceptions.h
6
53.85
 -46.15% gamgee/variant_builder_multi_sample_vector.h
11
62.07
 62.07% gamgee/sam_builder.h
Jobs
ID Job ID Ran Files Coverage
2 1446.2 192
87.97
 Travis Job 1446.2
Source Files on build 1446
Coverage ∆ File Lines Relevant Covered Missed Hits/Line