broadinstitute / viral-ngs / 5281
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DEFAULT BRANCH: master
Ran
Jobs 1
Files 39
Run time 4s
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Lines Coverage ∆ File
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 tools/krona.py
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 util/cmd.py
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 util/genbank.py
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 tools/cdhit.py
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 tools/megan.py
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 tools/kraken.py
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 tools/fastqc.py
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 tools/mvicuna.py
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 util/illumina_indices.py
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 tools/gatk.py
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 tools/tbl2asn.py
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 tools/muscle.py
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 tools/trimmomatic.py
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 tools/prinseq.py
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 tools/__init__.py
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 tools/snpeff.py
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 tools/trinity.py
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 tools/gap2seq.py
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 tools/spades.py
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 tools/vphaser2.py
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 tools/bwa.py
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 tools/blast.py
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 tools/bmtagger.py
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 tools/last.py
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 util/stats.py
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 tools/mafft.py
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 tools/samtools.py
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 tools/novoalign.py
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 tools/picard.py
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 util/misc.py
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 metagenomics.py
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 util/vcf.py
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 read_utils.py
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 util/file.py
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 tools/mummer.py
Jobs
ID Job ID Ran Files Coverage
6 5281.6 (TRAVIS_JOB=test_snakemake PYTEST_ADDOPTS="-rsxX -n 2 --durations=25 --fixture-durations=10 --junit-xml=pytest.xml --cov-report= --cov broad_utils --cov illumina --cov assembly --cov interhost --cov intrahost --cov metagenomics --cov ncbi --cov read_utils --cov reports --cov taxon_filter --cov tools --cov util" BUNDLE_SECRET=[secure]) 0
33.84
 Travis Job 5281.6
Source Files on build 5281
Detailed source file information is not available for this build.