Ran
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Jobs
1
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Files
39
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Run time
44s
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README BADGES
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travis-ci
1946 of 5750 relevant lines covered (33.84%)
0.34 hits per line
Lines | Coverage | ∆ | File |
---|---|---|---|
1 |
95.45 |
-2.27% | tools/krona.py |
2 |
77.55 |
-1.36% | util/cmd.py |
13 |
0.0 |
-13.27% | util/genbank.py |
14 |
51.43 |
-40.0% | tools/cdhit.py |
14 |
0.0 |
-31.82% | tools/megan.py |
17 |
68.24 |
-11.49% | tools/kraken.py |
20 |
0.0 |
-64.52% | tools/fastqc.py |
21 |
34.15 |
-51.22% | tools/mvicuna.py |
24 |
0.0 |
-27.27% | util/illumina_indices.py |
28 |
37.29 |
-47.46% | tools/gatk.py |
29 |
0.0 |
-43.94% | tools/tbl2asn.py |
30 |
0.0 |
-81.08% | tools/muscle.py |
30 |
0.0 |
-100.0% | tools/trimmomatic.py |
36 |
23.64 |
-65.45% | tools/prinseq.py |
39 |
42.48 |
-9.47% | tools/__init__.py |
40 |
0.0 |
-27.78% | tools/snpeff.py |
43 |
0.0 |
-91.49% | tools/trinity.py |
52 |
0.0 |
-94.55% | tools/gap2seq.py |
52 |
0.0 |
-89.66% | tools/spades.py |
52 |
0.0 |
-86.67% | tools/vphaser2.py |
54 |
35.22 |
-33.96% | tools/bwa.py |
57 |
0.0 |
-89.06% | tools/blast.py |
59 |
0.0 |
-83.1% | tools/bmtagger.py |
59 |
0.0 |
-86.76% | tools/last.py |
69 |
0.0 |
-60.53% | util/stats.py |
77 |
0.0 |
-87.5% | tools/mafft.py |
79 |
41.1 |
-48.47% | tools/samtools.py |
83 |
18.18 |
-62.88% | tools/novoalign.py |
85 |
43.52 |
-28.24% | tools/picard.py |
90 |
35.92 |
-29.13% | util/misc.py |
98 |
71.35 |
-13.63% | metagenomics.py |
102 |
0.0 |
-43.78% | util/vcf.py |
144 |
55.0 |
-26.67% | read_utils.py |
179 |
32.56 |
-37.61% | util/file.py |
280 |
0.0 |
-74.27% | tools/mummer.py |
Coverage | ∆ | File | Lines | Relevant | Covered | Missed | Hits/Line |
---|