bigdatagenomics / avocado / 215
81%
master: 91%

LAST BUILD BRANCH: adam-0.25.0
DEFAULT BRANCH: master
Ran
Jobs 4
Files 31
Run time 34s
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215

Pull #250

jenkins

GitHub 
<a href="https://github.com/bigdatagenomics/avocado/commit/<a class=hub.com/bigdatagenomics/avocado/commit/<a class="double-link" href="https://git"><a class=hub.com/bigdatagenomics/avocado/commit/<a class="double-link" href="https://git"><a class=hub.com/bigdatagenomics/avocado/commit/<a class="double-link" href="https://git"><a class=hub.com/bigdatagenomics/avocado/commit/ca9999d8d7cba9ee06a390415be2f95bc2034c1f">ca9999d8d">&lt;a href=&quot;https://github.com/bigdatagenomics/avocado/commit/</a><a class="double-link" href="https://github.com/bigdatagenomics/avocado/commit/&lt;a class=&quot;double-link&quot; href=&quot;https://git">&lt;a class=</a>hub.com/bigdatagenomics/avocado/commit/&lt;a class=&quot;double-link&quot; href=&quot;https://git">&lt;a class=</a>hub.com/bigdatagenomics/avocado/commit/&lt;a class=&quot;double-link&quot; href=&quot;https://git">&lt;a class=</a>hub.com/bigdatagenomics/avocado/commit/&lt;a class=&quot;double-link&quot; href=&quot;https://git">&lt;a class=</a>hub.com/bigdatagenomics/avocado/commit/ca9999d8d7cba9ee06a390415be2f95bc2034c1f">ca9999d8d</a><a href="https://github.com/bigdatagenomics/avocado/commit/ca9999d8d7cba9ee06a390415be2f95bc2034c1f">&quot;&gt;&amp;lt;a href=&amp;quot;https://github.com/bigdatagenomics/avocado/commit/&lt;/a&gt;&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/bigdatagenomics/avocado/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://git&quot;&gt;&amp;lt;a class=&lt;/a&gt;hub.com/bigdatagenomics/avocado/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://git&quot;&gt;&amp;lt;a class=&lt;/a&gt;hub.com/bigdatagenomics/avocado/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://git&quot;&gt;&amp;lt;a class=&lt;/a&gt;hub.com/bigdatagenomics/avocado/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://git&quot;&gt;&amp;lt;a class=&lt;/a&gt;hub.com/bigdatagenomics/avocado/commit/ca9999d8d7cba9ee06a390415be2f95bc2034c1f&quot;&gt;ca9999d8d&lt;/a&gt;&lt;a href=&quot;https://github.com/bigdatagenomics/avocado/commit/ca9999d8d7cba9ee06a390415be2f95bc2034c1f&quot;&gt;&amp;quot;&amp;gt;&amp;amp;lt;a href=&amp;amp;quot;https://github.com/bigdatagenomics/avocado/commit/&amp;lt;/a&amp;gt;&amp;lt;a class=&amp;quot... (continued)
Pull Request #250:

133 of 133 new or added lines in 8 files covered. (100.0%)

1293 of 1587 relevant lines covered (81.47%)

3.26 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
99.47
 avocado-core/src/main/scala/org/bdgenomics/avocado/util/HardFilterGenotypes.scala
2
85.07
 avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/JointAnnotatorCaller.scala
5
0.0
 avocado-cli/src/main/scala/org/bdgenomics/avocado/cli/BiallelicGenotyper.scala
5
86.11
 avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/SquareOffReferenceModel.scala
6
0.0
 avocado-cli/src/main/scala/org/bdgenomics/avocado/cli/TrioGenotyper.scala
6
95.64
 avocado-core/src/main/scala/org/bdgenomics/avocado/genotyping/BiallelicGenotyper.scala
7
0.0
 avocado-cli/src/main/scala/org/bdgenomics/avocado/cli/Jointer.scala
Jobs
ID Job ID Ran Files Coverage
1 215.1 44
81.47
2 215.2 44
81.47
3 215.3 44
81.47
4 215.4 44
81.47
Source Files on build 215
Coverage ∆ File Lines Relevant Covered Missed Hits/Line