pymc-devs / pymc3 / 6622
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ColCarroll 
<a href="https://github.com/pymc-devs/pymc3/commit/<a class=hub.com/pymc-devs/pymc3/commit/<a class="double-link" href="https://git"><a class=hub.com/pymc-devs/pymc3/commit/<a class="double-link" href="https://git"><a class=hub.com/pymc-devs/pymc3/commit/<a class="double-link" href="https://git"><a class=hub.com/pymc-devs/pymc3/commit/<a class="double-link" href="https://git"><a class=hub.com/pymc-devs/pymc3/commit/55da81d5e1302e5f01c71d7902ee68d01005c7cd">55da81d5e<a href="https://github.com/pymc-devs/pymc3/commit/55da81d5e1302e5f01c71d7902ee68d01005c7cd">&quot;&gt;&amp;lt;a href=&amp;quot;https://github.com/pymc-devs/pymc3/commit/&lt;/a&gt;&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/pymc-devs/pymc3/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://git&quot;&gt;&amp;lt;a class=&lt;/a&gt;hub.com/pymc-devs/pymc3/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://git&quot;&gt;&amp;lt;a class=&lt;/a&gt;hub.com/pymc-devs/pymc3/commit/55da81d5e1302e5f01c71d7902ee68d01005c7cd&quot;&gt;55da81d5e&lt;/a&gt;&lt;a href=&quot;https://github.com/pymc-devs/pymc3/commit/55da81d5e1302e5f01c71d7902ee68d01005c7cd&quot;&gt;&amp;lt;a href=&amp;quot;https://github.com/pymc-devs/pymc3/commit/55da81d5e1302e5f01c71d7902ee68d01005c7cd&amp;quot;&amp;gt;&amp;amp;lt;a href=&amp;amp;quot;https://github.com/pymc-devs/pymc3/commit/55da81d5e1302e5f01c71d7902ee68d01005c7cd&amp;amp;quot;&amp;amp;gt;&amp;amp;amp;quot;&amp;amp;amp;gt;Add LogExpM1 transformation (#2601)

* Add softplus transformation

Softplus transformation (from non-negative to reals) might be more numerically stable (see Fig. 9 in Kucukelbir et al. 2017).

* add test

* Change name and implement a more numerically stable logexpm1

See https://github.com/tensorflow/tensorflow/blob/&amp;amp;lt;/a&amp;amp;gt;&amp;amp;lt;a class=&amp;amp;quot;double-link&amp;amp;quot; href=&amp;amp;quot;https://github.com/pymc-devs/pymc3/commit/&amp;lt;/a&amp;gt;&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://github.com/pymc-devs/pymc3/commit/<a class="double-link" href="https://github.com/pymc-devs/pymc3/commit/0b0d3c12ace80381f4a44365d30275a9a262609b">0b0d3c12a</a>&amp;quot;&amp;gt;0b0d3c12a&amp;lt;/a&amp;gt;&amp;quot;&amp;gt;0b0d3c12a&amp;lt;/a&amp;gt;&amp;lt;a href=&amp;quot;https://github.com/pymc-devs/pymc3/commit/55da81d5e1302e5f01c71d7902ee68d01005c7cd&amp;quot;&amp;gt;/tensorflow/python/ops/distributions/util.py#L100</a>9 for the derivation

* change defaul</a>t transformation for PositiveContinuous

* Revert &quot;change default transformation for PositiveContinuous&quot;

This reverts commit 

100.0
pymc3/distributions/transforms.py
Jobs
ID Job ID Ran Files Coverage
1 6622.1 (PYTHON_VERSION=2.7 FLOATX='float32' TESTCMD="--durations=10 --ignore=pymc3/tests/test_examples.py --cov-append --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py --ignore=pymc3/tests/test_smc.py --ignore=pymc3/tests/test_updates.py --ignore=pymc3/tests/test_posteriors.py --ignore=pymc3/tests/test_sampling.py") 0
71.58
 Travis Job 6622.1
2 6622.2 (PYTHON_VERSION=2.7 FLOATX='float32' RUN_PYLINT="true" TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py pymc3/tests/test_smc.py pymc3/tests/test_sampling.py") 0
38.3
 Travis Job 6622.2
3 6622.3 (PYTHON_VERSION=2.7 FLOATX='float32' TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_posteriors.py") 0
26.21
 Travis Job 6622.3
4 6622.4 (PYTHON_VERSION=2.7 FLOATX='float32' TESTCMD="--durations=10 --cov-append pymc3/tests/test_variational_inference.py pymc3/tests/test_updates.py") 0
29.73
 Travis Job 6622.4
5 6622.5 (PYTHON_VERSION=2.7 FLOATX='float64' TESTCMD="--durations=10 --ignore=pymc3/tests/test_examples.py --cov-append --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py --ignore=pymc3/tests/test_smc.py --ignore=pymc3/tests/test_updates.py --ignore=pymc3/tests/test_posteriors.py --ignore=pymc3/tests/test_sampling.py") 0
73.06
 Travis Job 6622.5
6 6622.6 (PYTHON_VERSION=2.7 FLOATX='float64' RUN_PYLINT="true" TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py pymc3/tests/test_smc.py pymc3/tests/test_sampling.py") 0
38.86
 Travis Job 6622.6
7 6622.7 (PYTHON_VERSION=2.7 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_posteriors.py") 0
27.05
 Travis Job 6622.7
8 6622.8 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append --ignore=pymc3/tests/test_examples.py --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py --ignore=pymc3/tests/test_smc.py --ignore=pymc3/tests/test_updates.py --ignore=pymc3/tests/test_posteriors.py --ignore=pymc3/tests/test_sampling.py") 0
73.06
 Travis Job 6622.8
9 6622.9 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py pymc3/tests/test_smc.py pymc3/tests/test_sampling.py") 0
38.86
 Travis Job 6622.9
10 6622.10 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_posteriors.py") 0
27.06
 Travis Job 6622.10
11 6622.11 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_variational_inference.py pymc3/tests/test_updates.py") 0
29.72
 Travis Job 6622.11
Source Files on build 6622
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