bigdatagenomics / adam / 2356
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 7
Files 140
Run time 2min
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2356

Pull #1704

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/311615c4341eb3d25d23ae77095be8381a06005a">311615c43<a href="https://github.com/bigdatagenomics/adam/commit/311615c4341eb3d25d23ae77095be8381a06005a">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/c8550bc3334c25ba9f3e268145221434a7b468d9">c8550bc33</a>">c8550bc33</a><a href="https://github.com/bigdatagenomics/adam/commit/311615c4341eb3d25d23ae77095be8381a06005a"> into 51efbafef">51efbafef</a>
Pull Request #1704: Misc cleanup needed for bigdatagenomics/cannoli#65

9 of 9 new or added lines in 1 file covered. (100.0%)

6233 of 7468 relevant lines covered (83.46%)

5.81 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
5
68.0
 -15.33% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
96.92
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
95.51
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
95.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
93.75
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
90.29
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
62.96
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
95.77
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
85.32
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
84.13
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
92.21
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
62.74
 0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
74.07
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
4
66.23
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
5
94.34
 -0.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2356.1 140
83.06
2 2356.2 140
83.07
3 2356.3 140
83.06
4 2356.4 140
83.07
5 2356.5 140
83.07
6 2356.6 140
83.09
7 2356.7 140
83.09
Source Files on build 2356
Coverage ∆ File Lines Relevant Covered Missed Hits/Line