bigdatagenomics / adam / 2945

DEFAULT BRANCH: master
Ran
Jobs 8
Files 140
Run time 2min
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2945

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jenkins

fnothaft 
Merge VCF header lines with VCFHeaderLineCount.INTEGER correctly.

18 of 18 new or added lines in 1 file covered. (100.0%)

6231 of 7454 relevant lines covered (83.59%)

6.65 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
13
83.15
 0.66% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
77.78
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
65.63
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
98.46
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
92.23
 0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
89.81
 -0.64% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
64.2
 1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
67.31
 -1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
68.83
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
82.68
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
84.13
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
88.35
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
2
83.15
 0.66% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
86.67
 -13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
62.74
 -0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
95.51
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
4
94.47
 -0.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2945.1 140
83.16
2 2945.2 140
83.16
3 2945.3 140
83.15
4 2945.4 140
83.11
5 2945.5 140
83.12
6 2945.6 140
83.11
7 2945.7 140
83.12
8 2945.8 140
83.15
Source Files on build 2945
Coverage ∆ File Lines Relevant Covered Missed Hits/Line