bigdatagenomics / adam / 2331
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 140
Run time 2min
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2331

Pull #1685

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/634dcd303fc971a1f4379df541d71092aa796fe7">634dcd303<a href="https://github.com/bigdatagenomics/adam/commit/634dcd303fc971a1f4379df541d71092aa796fe7">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/ef50acd1b223ea0dcf8ce97c07942457f700762c">ef50acd1b</a>">ef50acd1b</a><a href="https://github.com/bigdatagenomics/adam/commit/634dcd303fc971a1f4379df541d71092aa796fe7"> into 9b51df598">9b51df598</a>
Pull Request #1685: [ADAM-1566] Merge VCF header lines with VCFHeaderLineCount.INTEGER correctly.

18 of 18 new or added lines in 1 file covered. (100.0%)

6230 of 7451 relevant lines covered (83.61%)

6.65 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
13
83.15
 1.08% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
77.78
 1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
65.63
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
98.46
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
83.15
 1.08% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.27
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.81
 -0.64% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
67.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
97.18
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
98.11
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
2
62.26
 0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
95.51
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
3
67.53
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
4
94.47
 -0.27% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2331.1 140
83.03
2 2331.2 140
83.03
3 2331.3 140
83.02
4 2331.4 140
83.02
5 2331.5 140
83.25
6 2331.6 140
83.26
7 2331.7 140
83.26
8 2331.8 140
83.25
Source Files on build 2331
Coverage ∆ File Lines Relevant Covered Missed Hits/Line