bigdatagenomics / adam / 2921

DEFAULT BRANCH: master
Ran
Jobs 7
Files 140
Run time 2min
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
2921

push

jenkins

heuermh 
[ADAM-1673] Don't set PL to empty when no PL is attached to a gVCF record.

Resolves #1763.

2 of 2 new or added lines in 1 file covered. (100.0%)

6206 of 7441 relevant lines covered (83.4%)

5.8 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.19
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
62.96
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
67.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
97.18
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
94.74
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
1
86.67
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
2
75.93
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
82.07
 0.03% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
96.63
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
66.23
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
85.32
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
90.29
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
81.84
 -0.84% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
4
61.79
 -0.94% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
Jobs
ID Job ID Ran Files Coverage
1 2921.1 140
82.96
2 2921.2 140
82.94
3 2921.3 140
82.94
4 2921.4 140
82.92
5 2921.5 140
82.92
6 2921.6 140
82.91
7 2921.7 140
82.91
Source Files on build 2921
Coverage ∆ File Lines Relevant Covered Missed Hits/Line