bigdatagenomics / adam / 2320
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 140
Run time 2min
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2320

Pull #1674

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/4d6e31d5ea3a6966452efa18a8f85e3f4fe6aa2b">4d6e31d5e<a href="https://github.com/bigdatagenomics/adam/commit/4d6e31d5ea3a6966452efa18a8f85e3f4fe6aa2b">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/003a1fe980406a6f88f4653a9c45311844fbb081">003a1fe98</a>">003a1fe98</a><a href="https://github.com/bigdatagenomics/adam/commit/4d6e31d5ea3a6966452efa18a8f85e3f4fe6aa2b"> into 6c8f8d7c7">6c8f8d7c7</a>
Pull Request #1674: [ADAM-1673] Don't set PL to empty when no PL is attached to a gVCF record

2 of 2 new or added lines in 1 file covered. (100.0%)

6206 of 7441 relevant lines covered (83.4%)

6.63 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
94.19
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
62.96
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
67.31
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
86.67
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
97.18
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
94.74
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
75.93
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
82.07
 0.03% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
96.63
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
66.23
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
85.32
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
90.29
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
81.84
 -0.84% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
4
61.79
 -0.94% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
Jobs
ID Job ID Ran Files Coverage
1 2320.1 140
82.96
2 2320.2 140
82.94
3 2320.3 140
82.96
4 2320.4 140
82.94
5 2320.5 140
82.91
6 2320.6 140
82.92
7 2320.7 140
82.92
8 2320.8 140
82.91
Source Files on build 2320
Coverage ∆ File Lines Relevant Covered Missed Hits/Line