pymc-devs / pymc3 / 6146
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Jobs 11
Files 137
Run time 36min
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<a href="https://github.com/pymc-devs/pymc3/commit/<a class=hub.com/pymc-devs/pymc3/commit/f845575dbca856a846a09729bbe4b6fd5e467729">f845575db<a href="https://github.com/pymc-devs/pymc3/commit/f845575dbca856a846a09729bbe4b6fd5e467729">&quot;&gt;Implement random method for LKJCorr (#2443)

* [WIP] implement random method for LKJCorr

using the algorithm in LKJ 2009(vine method based on a C-vine)

* pep8 fix

* import random method

* Revert &amp;quot;import random method&quot;

This reverts commit </a><a class="double-link" href="https://github.com/pymc-devs/pymc3/commit/<a class="double-link" href="https://github.com/pymc-devs/pymc3/commit/42e620eb9529f82cdb42c59c5b5cfc620c7c4a34">42e620eb9</a>">42e620eb9</a><a href="https://github.com/pymc-devs/pymc3/commit/f845575dbca856a846a09729bbe4b6fd5e467729">.

* restrict dimension n to n &gt; 1, fix random sample for n = 2

* unify parameter naming between LKJCorr and LKJCholeskyCov

* improved random method

* Bug fix in shape

* Add test

* fix test

* pep8 clean up, fixed test warning

* improved random method

* forked R code for random method

generated Corr matrix is now positive definite.

38 of 38 new or added lines in 2 files covered. (100.0%)

13479 of 15544 relevant lines covered (86.72%)

4.85 hits per line

Jobs
ID Job ID Ran Files Coverage
1 6146.1 (PYTHON_VERSION=2.7 FLOATX='float32' TESTCMD="--durations=10 --ignore=pymc3/tests/test_examples.py --cov-append --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py --ignore=pymc3/tests/test_smc.py --ignore=pymc3/tests/test_updates.py --ignore=pymc3/tests/test_posteriors.py --ignore=pymc3/tests/test_sampling.py") 0
71.21
 Travis Job 6146.1
2 6146.2 (PYTHON_VERSION=2.7 FLOATX='float32' RUN_PYLINT="true" TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py pymc3/tests/test_smc.py pymc3/tests/test_sampling.py") 0
39.74
 Travis Job 6146.2
3 6146.3 (PYTHON_VERSION=2.7 FLOATX='float32' TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_posteriors.py") 0
29.08
 Travis Job 6146.3
4 6146.4 (PYTHON_VERSION=2.7 FLOATX='float32' TESTCMD="--durations=10 --cov-append pymc3/tests/test_variational_inference.py pymc3/tests/test_updates.py") 0
29.18
 Travis Job 6146.4
5 6146.5 (PYTHON_VERSION=2.7 FLOATX='float64' TESTCMD="--durations=10 --ignore=pymc3/tests/test_examples.py --cov-append --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py --ignore=pymc3/tests/test_smc.py --ignore=pymc3/tests/test_updates.py --ignore=pymc3/tests/test_posteriors.py --ignore=pymc3/tests/test_sampling.py") 0
72.75
 Travis Job 6146.5
6 6146.6 (PYTHON_VERSION=2.7 FLOATX='float64' RUN_PYLINT="true" TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py pymc3/tests/test_smc.py pymc3/tests/test_sampling.py") 0
40.35
 Travis Job 6146.6
7 6146.7 (PYTHON_VERSION=2.7 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_posteriors.py") 0
29.99
 Travis Job 6146.7
8 6146.8 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append --ignore=pymc3/tests/test_examples.py --ignore=pymc3/tests/test_distributions_random.py --ignore=pymc3/tests/test_variational_inference.py --ignore=pymc3/tests/test_shared.py --ignore=pymc3/tests/test_smc.py --ignore=pymc3/tests/test_updates.py --ignore=pymc3/tests/test_posteriors.py --ignore=pymc3/tests/test_sampling.py") 0
72.75
 Travis Job 6146.8
9 6146.9 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_distributions_random.py pymc3/tests/test_shared.py pymc3/tests/test_smc.py pymc3/tests/test_sampling.py") 0
40.34
 Travis Job 6146.9
10 6146.10 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_examples.py pymc3/tests/test_posteriors.py") 0
30.0
 Travis Job 6146.10
11 6146.11 (PYTHON_VERSION=3.6 FLOATX='float64' TESTCMD="--durations=10 --cov-append pymc3/tests/test_variational_inference.py pymc3/tests/test_updates.py") 0
29.17
 Travis Job 6146.11
Source Files on build 6146
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