bigdatagenomics / adam / 2310
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 140
Run time 2min
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2310

Pull #1627

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/03795343e3d8d2197ab3fefb01e610a6eea4485a">03795343e<a href="https://github.com/bigdatagenomics/adam/commit/03795343e3d8d2197ab3fefb01e610a6eea4485a">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/6778abd8d3a909b6990301a1aa252891f3067f1e">6778abd8d</a>">6778abd8d</a><a href="https://github.com/bigdatagenomics/adam/commit/03795343e3d8d2197ab3fefb01e610a6eea4485a"> into 903269819">903269819</a>
Pull Request #1627: [ADAM-1615] Add transform and transmute APIs to Java, R, and Python

70 of 70 new or added lines in 10 files covered. (100.0%)

6198 of 7426 relevant lines covered (83.46%)

6.64 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
0.0
 adam-apis/src/main/scala/org/bdgenomics/adam/api/python/DataFrameConversionWrapper.scala
13
68.82
 -2.52% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
49
0.0
 adam-apis/src/main/scala/org/bdgenomics/adam/api/java/GenomicDatasetConverters.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
77.78
 5.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
96.63
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
95.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
91.67
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
89.81
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
86.24
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
82.68
 0.05% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
67.53
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
62.26
 -0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
4
94.47
 -0.54% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2310.1 140
83.03
2 2310.2 140
83.03
3 2310.3 140
83.02
4 2310.4 140
83.02
5 2310.5 140
83.01
6 2310.6 140
83.02
7 2310.7 140
83.01
8 2310.8 140
83.02
Source Files on build 2310
Coverage ∆ File Lines Relevant Covered Missed Hits/Line