bigdatagenomics / adam / 2302
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2302

Pull #1637

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/0031c50b8f269eb7766f13680bf794baef3cfb48">0031c50b8<a href="https://github.com/bigdatagenomics/adam/commit/0031c50b8f269eb7766f13680bf794baef3cfb48">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/2fa633ea0e67e4ecd8f43004cf140cd1f90b817d">2fa633ea0</a>">2fa633ea0</a><a href="https://github.com/bigdatagenomics/adam/commit/0031c50b8f269eb7766f13680bf794baef3cfb48"> into c8a2202fc">c8a2202fc</a>
Pull Request #1637: added ExtractRegions

14 of 14 new or added lines in 1 file covered. (100.0%)

6186 of 7371 relevant lines covered (83.92%)

6.69 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
78.1
 3.37% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
62.74
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
77.78
 5.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
95.51
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
95.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
63.46
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
80.0
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
85.32
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
82.63
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
84.13
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
2
87.38
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
94.74
 -0.27% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
87.38
 -1.94% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
4
64.94
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
5
81.35
 -0.7% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
Jobs
ID Job ID Ran Files Coverage
1 2302.1 138
83.58
2 2302.2 138
83.57
3 2302.3 138
83.58
4 2302.4 138
83.57
5 2302.5 138
83.6
6 2302.6 138
83.6
7 2302.7 138
83.58
8 2302.8 138
83.58
Source Files on build 2302
Coverage ∆ File Lines Relevant Covered Missed Hits/Line