bigdatagenomics / adam / 2301
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2301

Pull #1637

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/f9da83c333b42b24f9fa54d08b91ac0d49580096">f9da83c33<a href="https://github.com/bigdatagenomics/adam/commit/f9da83c333b42b24f9fa54d08b91ac0d49580096">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/604c486033760049364c2fae25dceef683a7a7b7">604c48603</a>">604c48603</a><a href="https://github.com/bigdatagenomics/adam/commit/f9da83c333b42b24f9fa54d08b91ac0d49580096"> into c8a2202fc">c8a2202fc</a>
Pull Request #1637: added ExtractRegions

15 of 15 new or added lines in 1 file covered. (100.0%)

6201 of 7372 relevant lines covered (84.12%)

6.69 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
78.3
 3.58% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
75.93
 3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
95.51
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
95.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
88.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
86.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
94.88
 -0.13% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
1
98.11
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
84.13
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
63.21
 0.47% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
68.83
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
85.32
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
82.07
 -0.56% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
4
81.63
 -0.42% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
7
78.3
 3.58% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2301.1 138
83.57
2 2301.2 138
83.57
3 2301.3 138
83.56
4 2301.4 138
83.56
5 2301.5 138
83.75
6 2301.6 138
83.76
7 2301.7 138
83.76
8 2301.8 138
83.75
Source Files on build 2301
Coverage ∆ File Lines Relevant Covered Missed Hits/Line