bigdatagenomics / adam / 2857

DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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jenkins

fnothaft 
[ADAM-1490] Add asSingleFile to saveAsFastq and related. (#1621)

Add asSingleFile to saveAsFastq and related. Resolves #1490.

15 of 15 new or added lines in 1 file covered. (100.0%)

6177 of 7357 relevant lines covered (83.96%)

6.68 hits per line

Uncovered Changes

Lines Coverage ∆ File
4
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala

Coverage Regressions

Lines Coverage ∆ File
4
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
100.0
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
100.0
 adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2857.1 0
83.54
2 2857.2 0
83.54
3 2857.3 0
83.52
4 2857.4 0
83.52
5 2857.5 0
83.54
6 2857.6 0
83.53
7 2857.7 0
83.54
8 2857.8 0
83.53
Source Files on build 2857
Detailed source file information is not available for this build.