bigdatagenomics / adam / 2254
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 7
Files 137
Run time 55s
Badge
Embed ▾
README BADGES
x

If you need to use a raster PNG badge, change the '.svg' to '.png' in the link

Markdown

Textile

RDoc

HTML

Rst
2254

Pull #1617

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/247206fda42d11e373979828a387306f046ebff6">247206fda<a href="https://github.com/bigdatagenomics/adam/commit/247206fda42d11e373979828a387306f046ebff6">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/2b215a3f21b0df31ae76fab5de91911412d5824a">2b215a3f2</a>">2b215a3f2</a><a href="https://github.com/bigdatagenomics/adam/commit/247206fda42d11e373979828a387306f046ebff6"> into 76525367a">76525367a</a>
Pull Request #1617: [ADAM-1616] Resolve installation directory if scripts are symlinks.

6124 of 7269 relevant lines covered (84.25%)

5.9 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
65.63
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
93.02
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
88.35
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
95.77
 -1.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
71.34
 -0.32% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
96.23
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
92.0
 -1.33% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
98.88
 -0.37% adam-core/src/main/scala/org/bdgenomics/adam/serialization/ADAMKryoRegistrator.scala
1
87.38
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
2
61.32
 -0.94% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
81.49
 -0.28% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
95.51
 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
87.5
 -8.33% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
66.23
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
2
82.46
 -0.58% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
2
59.46
 -5.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
3
72.22
 -5.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
4
82.57
 -3.67% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
5
93.8
 -0.67% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2254.1 137
84.25
2 2254.2 137
84.23
3 2254.3 137
84.23
4 2254.4 137
84.25
5 2254.5 137
84.23
6 2254.6 137
84.23
7 2254.7 137
84.25
Source Files on build 2254
Coverage ∆ File Lines Relevant Covered Missed Hits/Line