bigdatagenomics / adam / 2228
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2228

Pull #1605

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/7acd051721ff5bb2b3e4ca9bee03de9654f431ef">7acd05172<a href="https://github.com/bigdatagenomics/adam/commit/7acd051721ff5bb2b3e4ca9bee03de9654f431ef">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/d2e4371998f5e62e97e3b3f9f920c54561a33238">d2e437199</a>">d2e437199</a><a href="https://github.com/bigdatagenomics/adam/commit/7acd051721ff5bb2b3e4ca9bee03de9654f431ef"> into 406d1e39b">406d1e39b</a>
Pull Request #1605: Adding examples of how to use joins in the real world

5821 of 6914 relevant lines covered (84.19%)

6.69 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
61.42
 -0.51% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
82.33
 0.28% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
97.75
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
91.26
 1.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
89.81
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
86.67
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
84.13
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
94.19
 -2.33% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
3
60.49
 -2.47% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
3
64.94
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
5
93.33
 2.42% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
20
82.81
 -0.15% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
39
90.16
 -0.44% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2228.1 138
83.73
2 2228.2 138
83.74
3 2228.3 138
83.73
4 2228.4 138
83.64
5 2228.5 138
83.74
6 2228.6 138
83.63
7 2228.7 138
83.64
8 2228.8 138
83.63
Source Files on build 2228
Coverage ∆ File Lines Relevant Covered Missed Hits/Line