bigdatagenomics / adam / 2215
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2215

Pull #1598

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/5fc8a521f8e0341cced8f723ddec18bed6dfd987">5fc8a521f<a href="https://github.com/bigdatagenomics/adam/commit/5fc8a521f8e0341cced8f723ddec18bed6dfd987">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/30a61190688da7dd2cf78418110617069eafed0d">30a611906</a>">30a611906</a><a href="https://github.com/bigdatagenomics/adam/commit/5fc8a521f8e0341cced8f723ddec18bed6dfd987"> into 607cd50be">607cd50be</a>
Pull Request #1598: [ADAM-1576] Allow translation between two different GenomicRDD types.

194 of 194 new or added lines in 2 files covered. (100.0%)

5990 of 7086 relevant lines covered (84.53%)

6.72 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
9
93.27
 2.67% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
75.93
 3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
91.26
 1.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
95.83
 -4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
93.27
 2.67% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
1
86.24
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
98.11
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
84.13
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
90.91
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
2
94.38
 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
86.67
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
60.41
 -1.52% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
81.77
 -0.28% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
63.64
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
Jobs
ID Job ID Ran Files Coverage
1 2215.1 138
83.99
2 2215.2 138
83.98
3 2215.3 138
83.99
4 2215.4 138
83.98
5 2215.5 138
83.91
6 2215.6 138
83.9
7 2215.7 138
83.91
8 2215.8 138
83.9
Source Files on build 2215
Coverage ∆ File Lines Relevant Covered Missed Hits/Line