bigdatagenomics / adam / 2214
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 7
Files 138
Run time 1min
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2214

Pull #1600

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/a7a15e3a519b94321096e4eb6411987849dde8f5">a7a15e3a5<a href="https://github.com/bigdatagenomics/adam/commit/a7a15e3a519b94321096e4eb6411987849dde8f5">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/b251fbb07e3fcad78eaead8d578335bc714dc966">b251fbb07</a>">b251fbb07</a><a href="https://github.com/bigdatagenomics/adam/commit/a7a15e3a519b94321096e4eb6411987849dde8f5"> into 238e0445c">238e0445c</a>
Pull Request #1600: [ADAM-1599] Add explicit functions for updating GenomicRDD metadata.

71 of 71 new or added lines in 8 files covered. (100.0%)

5806 of 6899 relevant lines covered (84.16%)

6.42 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
92.31
 4.07% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
1
90.91
 -0.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
3
71.2
 -1.21% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
96.92
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
82.05
 0.14% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
88.37
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastqRecordConverter.scala
1
96.63
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.81
 0.64% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
93.33
 -6.67% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
71.2
 -1.21% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
90.91
 -0.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
3
72.22
 -5.56% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
4
89.32
 -2.91% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
5
90.6
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
5
64.94
 -3.9% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
Jobs
ID Job ID Ran Files Coverage
1 2214.1 227
82.51
2 2214.2 138
83.65
3 2214.3 138
83.63
4 2214.4 138
83.61
5 2214.5 138
83.61
6 2214.6 138
83.62
7 2214.7 138
83.62
Source Files on build 2214
Coverage ∆ File Lines Relevant Covered Missed Hits/Line