bigdatagenomics / adam / 2207
85%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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2207

Pull #1598

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/9a203bc7b7da7f3607992a0a05e8363fed309588">9a203bc7b<a href="https://github.com/bigdatagenomics/adam/commit/9a203bc7b7da7f3607992a0a05e8363fed309588">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/e25d5a6eb9a48ef2c801624c8fd94321e5e5f37f">e25d5a6eb</a>">e25d5a6eb</a><a href="https://github.com/bigdatagenomics/adam/commit/9a203bc7b7da7f3607992a0a05e8363fed309588"> into 238e0445c">238e0445c</a>
Pull Request #1598: [ADAM-1576] Allow translation between two different GenomicRDD types.

202 of 202 new or added lines in 2 files covered. (100.0%)

5948 of 7037 relevant lines covered (84.52%)

6.72 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
72.64
 0.24% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
9
92.63
 1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformGenotypes.scala
1
65.63
 -3.13% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
84.21
 -2.63% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformVariants.scala
1
96.63
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
95.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
91.26
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
72.64
 0.24% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
1
70.13
 1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
86.24
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
77.78
 -5.56% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
3
80.0
 -20.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
4
92.63
 1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2207.1 138
83.93
2 2207.2 138
83.91
3 2207.3 138
83.93
4 2207.4 138
83.91
5 2207.5 138
83.97
6 2207.6 138
83.98
7 2207.7 138
83.97
8 2207.8 138
83.98
Source Files on build 2207
Coverage ∆ File Lines Relevant Covered Missed Hits/Line