bigdatagenomics / adam / 2205
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 138
Run time 1min
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Pull #1528

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/d2726cbf553d735190f232d2b754b7247d4d26cf">d2726cbf5<a href="https://github.com/bigdatagenomics/adam/commit/d2726cbf553d735190f232d2b754b7247d4d26cf">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/56dd89b105e249d909475e0740b11dc9fb77ad47">56dd89b10</a>">56dd89b10</a><a href="https://github.com/bigdatagenomics/adam/commit/d2726cbf553d735190f232d2b754b7247d4d26cf"> into 324ae74d3">324ae74d3</a>
Pull Request #1528: [ADAM-1501] Compute coverage using Dataset API.

31 of 31 new or added lines in 2 files covered. (100.0%)

5755 of 6850 relevant lines covered (84.01%)

6.7 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
81.99
 1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
91.11
 -2.22% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/consensus/NormalizationUtils.scala
1
77.78
 1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
98.46
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
96.63
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
94.27
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
92.23
 2.91% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
1
89.17
 -0.64% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
67.31
 -1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
94.37
 -1.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ShuffleRegionJoin.scala
1
91.51
 0.46% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
1
86.24
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
81.99
 1.11% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
2
91.67
 -8.33% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
2
87.38
 -1.94% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
3
60.41
 -0.51% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
60.49
 -3.7% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
5
72.4
 -1.62% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2205.1 138
83.75
2 2205.2 138
83.75
3 2205.3 138
83.76
4 2205.4 138
83.76
5 2205.5 138
83.66
6 2205.6 138
83.65
7 2205.7 138
83.66
8 2205.8 138
83.65
Source Files on build 2205
Coverage ∆ File Lines Relevant Covered Missed Hits/Line