bigdatagenomics / adam / 2194
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 152
Run time 1min
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2194

Pull #1581

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/21b2f1bb312d1fcb4e39ba7bce64e54a25419260">21b2f1bb3<a href="https://github.com/bigdatagenomics/adam/commit/21b2f1bb312d1fcb4e39ba7bce64e54a25419260">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/2ebac20b89a1eaf39a0a9beda62f528f5c632129">2ebac20b8</a>">2ebac20b8</a><a href="https://github.com/bigdatagenomics/adam/commit/21b2f1bb312d1fcb4e39ba7bce64e54a25419260"> into 97a8498be">97a8498be</a>
Pull Request #1581: [ADAM-1438] Add ability to save FASTA back as a single file.

14 of 14 new or added lines in 2 files covered. (100.0%)

5735 of 6815 relevant lines covered (84.15%)

6.68 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
73.86
 1.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
61.42
 1.02% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
75.93
 3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
70.13
 5.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
62.16
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
98.11
 -1.89% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/FlagStat.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
95.35
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
2
82.05
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
89.32
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
61.73
 -2.47% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
3
94.38
 -2.25% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
6
90.33
 -0.47% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2194.1 152
83.43
2 2194.2 152
83.43
3 2194.3 152
83.45
4 2194.4 152
83.68
5 2194.5 152
83.45
6 2194.6 152
83.67
7 2194.7 152
83.67
8 2194.8 152
83.68
Source Files on build 2194
Coverage ∆ File Lines Relevant Covered Missed Hits/Line