bigdatagenomics / adam / 2175
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 154
Run time 54s
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2175

Pull #1557

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/2dd98e31d7a1b9c9dd1f2c7982301eee050f5d92">2dd98e31d<a href="https://github.com/bigdatagenomics/adam/commit/2dd98e31d7a1b9c9dd1f2c7982301eee050f5d92">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/52258fd14eec5f048faf467c1bdae5032a943451">52258fd14</a>">52258fd14</a><a href="https://github.com/bigdatagenomics/adam/commit/2dd98e31d7a1b9c9dd1f2c7982301eee050f5d92"> into 8572fb7e8">8572fb7e8</a>
Pull Request #1557: [ADAM-1449] Add loadSequenceDictionary to ADAM context.

28 of 28 new or added lines in 5 files covered. (100.0%)

5428 of 6523 relevant lines covered (83.21%)

6.63 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
3
84.17
 0.72% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
75.93
 1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
1
66.67
 -3.03% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
77.78
 -5.56% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/InterleavedFASTQInFormatter.scala
1
84.58
 -0.4% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
95.0
 -0.38% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/RealignIndels.scala
1
89.83
 -1.69% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
87.5
 -2.5% adam-core/src/main/scala/org/bdgenomics/adam/util/FileExtensions.scala
1
95.35
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.66
 -0.69% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
61.73
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
2
55.74
 -1.09% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
85.32
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
81.91
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
2
91.26
 -1.94% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
80.0
 -13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
66.23
 -1.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
7
89.21
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
10
84.17
 0.72% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2175.1 252
82.78
2 2175.2 252
82.78
3 2175.3 252
82.77
4 2175.4 252
82.97
5 2175.5 252
82.97
6 2175.6 252
82.95
7 2175.7 252
82.77
8 2175.8 252
82.95
Source Files on build 2175
Coverage ∆ File Lines Relevant Covered Missed Hits/Line