bigdatagenomics / adam / 2173
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 152
Run time 4min
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Pull #1391

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/2eead442b33943dbe5d11820532bc58cf33d6865">2eead442b<a href="https://github.com/bigdatagenomics/adam/commit/2eead442b33943dbe5d11820532bc58cf33d6865">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/9ee0375d2c4554b77acd04f9b15b1f060fe5033d">9ee0375d2</a>">9ee0375d2</a><a href="https://github.com/bigdatagenomics/adam/commit/2eead442b33943dbe5d11820532bc58cf33d6865"> into 0306717cb">0306717cb</a>
Pull Request #1391: [ADAM-1018] Add support for Spark SQL Datasets.

253 of 253 new or added lines in 12 files covered. (100.0%)

5571 of 6711 relevant lines covered (83.01%)

6.6 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
89.47
 1.01% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/FragmentRDD.scala
2
87.5
 -2.5% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/GenotypeRDD.scala
2
89.19
 -1.29% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantRDD.scala
3
69.59
 -0.06% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
4
72.94
 -0.3% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
4
84.21
 -1.24% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/CoverageRDD.scala
4
83.73
 -0.29% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
11
83.57
 -0.63% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
21
81.79
 -3.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
92.59
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
1
93.02
 -1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
89.66
 -0.69% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
61.73
 -1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
86.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
56.83
 1.64% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
77.78
 1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
59.46
 -5.41% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
3
81.77
 -0.14% adam-core/src/main/scala/org/bdgenomics/adam/converters/VariantContextConverter.scala
3
64.94
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
83.49
 -0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
9
83.73
 -0.29% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
33
83.57
 -0.63% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
80
69.59
 -0.06% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2173.1 266
82.46
2 2173.2 266
82.6
3 2173.3 266
82.48
4 2173.4 266
82.61
5 2173.5 266
82.48
6 2173.6 266
82.6
7 2173.7 266
82.61
8 2173.8 266
82.46
Source Files on build 2173
Coverage ∆ File Lines Relevant Covered Missed Hits/Line