340
96%
master: 97%

Ran 15 Jun 2017 03:30PM UTC

Jobs 2

Files 27

Run time 12min

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Build # 340

Build Type

push

travis-ci

Committed by

mvdbeek

Commit Message

Refine cluster splitting

Previously a cluster of TE reads would be split if the orientation of
reads would switch from Reverse to Forward (which should not happen if
there is no closeby TE and no sequencing artefact caused wrong
orientation of reads). To avoid wrongly splitting clusters due to a
stray read all reads that contribute to the cluster are assembled into
contigs. Reads that may contribute to a new cluster (cluster_b in the
code) will be kept in the original cluster if the align to one of the
contigs that is clearly part of cluster_a.

Run Details

1626 of 1764 relevant lines covered (92.18%)

1.84 hits per line

Jobs

ID	Job ID	Ran	Files	Coverage
1	340.1	15 Jun 2017 03:42PM UTC	0	92.12	Travis Job 340.1
2	340.2	15 Jun 2017 03:30PM UTC	0	92.12	Travis Job 340.2

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