bigdatagenomics / adam / 2092
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 152
Run time 1min
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2092

Pull #1563

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/0559070b9ec2a03179a36a183fe6a35c97bc31f8">0559070b9<a href="https://github.com/bigdatagenomics/adam/commit/0559070b9ec2a03179a36a183fe6a35c97bc31f8">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/b65cb9a2cc1d287797a5fe141dbcffb471180f89">b65cb9a2c</a>">b65cb9a2c</a><a href="https://github.com/bigdatagenomics/adam/commit/0559070b9ec2a03179a36a183fe6a35c97bc31f8"> into ad5ae6df6">ad5ae6df6</a>
Pull Request #1563: [ADAM-1562] Index off by one for VCF genotype Number=A attributes.

1 of 1 new or added line in 1 file covered. (100.0%)

5396 of 6478 relevant lines covered (83.3%)

6.63 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
87.5
 -6.25% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFeatures.scala
1
55.74
 1.09% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
98.46
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
95.51
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
94.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
95.83
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
62.96
 1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
2
63.64
 -6.06% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
2
75.93
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
81.96
 0.46% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
84.4
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
84.19
 -0.79% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
3
90.74
 -2.78% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
3
66.23
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
Jobs
ID Job ID Ran Files Coverage
1 2092.1 251
82.74
2 2092.2 251
82.74
3 2092.3 251
82.73
4 2092.4 251
82.73
5 2092.5 251
82.91
6 2092.6 251
82.91
7 2092.7 251
82.93
8 2092.8 251
82.93
Source Files on build 2092
Coverage ∆ File Lines Relevant Covered Missed Hits/Line