bigdatagenomics / adam / 2089
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 152
Run time 46s
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2089

Pull #1560

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/37fd127a9f15cfa27109f64588dbfbb6b47dfa00">37fd127a9<a href="https://github.com/bigdatagenomics/adam/commit/37fd127a9f15cfa27109f64588dbfbb6b47dfa00">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/87fd12b6a1de614bc54d57bb9a23a53ceeb47d62">87fd12b6a</a>">87fd12b6a</a><a href="https://github.com/bigdatagenomics/adam/commit/37fd127a9f15cfa27109f64588dbfbb6b47dfa00"> into ad5ae6df6">ad5ae6df6</a>
Pull Request #1560: Freebayes FORMAT=<ID=AO,Number=A attribute throws ArrayIndexOutOfBoundsException

1 of 1 new or added line in 1 file covered. (100.0%)

5396 of 6478 relevant lines covered (83.3%)

6.63 hits per line

Uncovered Existing Lines

Lines Coverage ∆ File
1
55.74
 1.09% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
95.83
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
62.96
 1.23% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
98.46
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
94.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
95.51
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
87.5
 -6.25% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFeatures.scala
2
75.93
 -1.85% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
63.64
 -6.06% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
2
81.96
 0.46% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
84.4
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
2
84.19
 -0.79% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
3
66.23
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
90.74
 -2.78% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
Jobs
ID Job ID Ran Files Coverage
1 2089.1 251
82.73
2 2089.2 251
82.73
3 2089.3 251
82.74
4 2089.4 251
82.74
5 2089.5 251
82.91
6 2089.6 251
82.91
7 2089.7 251
82.93
8 2089.8 251
82.93
Source Files on build 2089
Coverage ∆ File Lines Relevant Covered Missed Hits/Line