bigdatagenomics / adam / 2085
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 154
Run time 56s
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2085

Pull #1557

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/7b58f4969c084318949a92f5706dee880eb55e82">7b58f4969<a href="https://github.com/bigdatagenomics/adam/commit/7b58f4969c084318949a92f5706dee880eb55e82">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/0727a619f5c6b2dd352fc40505e46ea5bae2be43">0727a619f</a>">0727a619f</a><a href="https://github.com/bigdatagenomics/adam/commit/7b58f4969c084318949a92f5706dee880eb55e82"> into ad5ae6df6">ad5ae6df6</a>
Pull Request #1557: Add loadSequenceDictionary to ADAM context.

36 of 36 new or added lines in 6 files covered. (100.0%)

5418 of 6505 relevant lines covered (83.29%)

6.62 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
81.56
 0.05% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
93.75
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFeatures.scala
1
61.73
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/RecordGroupDictionary.scala
1
85.32
 0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
84.98
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
82.54
 -1.59% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/realignment/IndelRealignmentTarget.scala
1
87.5
 -2.5% adam-core/src/main/scala/org/bdgenomics/adam/util/FileExtensions.scala
1
88.24
 -5.88% adam-core/src/main/scala/org/bdgenomics/adam/util/IndexedFastaFile.scala
1
95.83
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
96.92
 -1.54% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
96.63
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
66.67
 -3.03% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
2
55.19
 0.55% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
2
74.07
 -3.7% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
89.32
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
66.23
 -2.6% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
23
84.03
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
58
81.56
 0.05% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2085.1 253
82.83
2 2085.2 253
82.84
3 2085.3 253
82.61
4 2085.4 253
82.84
5 2085.5 253
82.83
6 2085.6 253
82.61
7 2085.7 253
82.63
8 2085.8 253
82.63
Source Files on build 2085
Coverage ∆ File Lines Relevant Covered Missed Hits/Line