bigdatagenomics / adam / 2079
83%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 150
Run time 1min
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2079

Pull #1555

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/0eb3bcb4d7c660f505f886d16e07dcd7451842d8">0eb3bcb4d<a href="https://github.com/bigdatagenomics/adam/commit/0eb3bcb4d7c660f505f886d16e07dcd7451842d8">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/2377e9dfe7154df05b0342b6edb19617f2f2dd8e">2377e9dfe</a>">2377e9dfe</a><a href="https://github.com/bigdatagenomics/adam/commit/0eb3bcb4d7c660f505f886d16e07dcd7451842d8"> into b7762c2b3">b7762c2b3</a>
Pull Request #1555: [ADAM-1513] Strandedness for FeatureRDDs

6 of 6 new or added lines in 2 files covered. (100.0%)

5296 of 6392 relevant lines covered (82.85%)

6.62 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
66.52
 1.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
96.88
 -3.13% adam-core/src/main/scala/org/bdgenomics/adam/algorithms/smithwaterman/SmithWaterman.scala
1
86.67
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab5InFormatter.scala
1
89.47
 -1.75% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
85.0
 -5.0% adam-core/src/main/scala/org/bdgenomics/adam/util/FileExtensions.scala
1
67.31
 1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
94.38
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
92.59
 -0.93% adam-core/src/main/scala/org/bdgenomics/adam/converters/AlignmentRecordConverter.scala
2
75.93
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
79.85
 0.5% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
93.75
 -1.04% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
2
56.28
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
88.35
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
3
62.34
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
81.65
 0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
3
82.19
 -1.72% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureRDD.scala
12
72.86
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
17
66.52
 1.02% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
34
84.46
 0.4% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
Jobs
ID Job ID Ran Files Coverage
1 2079.1 250
82.73
2 2079.2 250
82.73
3 2079.3 250
82.74
4 2079.4 250
82.73
5 2079.5 250
82.74
6 2079.6 250
82.74
7 2079.7 250
82.73
8 2079.8 250
82.74
Source Files on build 2079
Coverage ∆ File Lines Relevant Covered Missed Hits/Line