bigdatagenomics / adam / 2710

DEFAULT BRANCH: master
Ran
Jobs 8
Files 149
Run time 1min
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2710

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jenkins

heuermh 
[ADAM-1359] Merge `reads2fragments` and `fragments2reads` into `transformFragments`

Resolves #1359. Also, propegates the quality score binner (#1485) up to the
`transformFragments` CLI.

45 of 45 new or added lines in 1 file covered. (100.0%)

5196 of 6340 relevant lines covered (81.96%)

6.55 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
2
95.56
 adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformFragments.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
77.78
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
3
55.74
 -1.64% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
Jobs
ID Job ID Ran Files Coverage
1 2710.1 249
81.77
2 2710.2 249
81.77
3 2710.3 249
81.78
4 2710.4 249
81.88
5 2710.5 249
81.78
6 2710.6 249
81.86
7 2710.7 249
81.86
8 2710.8 249
81.88
Source Files on build 2710
Coverage ∆ File Lines Relevant Covered Missed Hits/Line