bigdatagenomics / adam / 2053
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 150
Run time 1min
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2053

Pull #1540

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/7765fd6d271687403cfcf70894a0c79f06b710eb">7765fd6d2<a href="https://github.com/bigdatagenomics/adam/commit/7765fd6d271687403cfcf70894a0c79f06b710eb">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/3cb7dd1af4c5fc90b50e033c91f2abc0a07ac343">3cb7dd1af</a>">3cb7dd1af</a><a href="https://github.com/bigdatagenomics/adam/commit/7765fd6d271687403cfcf70894a0c79f06b710eb"> into 2820e940c">2820e940c</a>
Pull Request #1540: Support locus predicate in Transform

27 of 27 new or added lines in 2 files covered. (100.0%)

5259 of 6355 relevant lines covered (82.75%)

6.61 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
89.81
 0.08% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
2
59.9
 3.61% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
96.92
 -0.05% adam-core/src/main/scala/org/bdgenomics/adam/converters/FastaConverter.scala
1
95.35
 1.16% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
94.27
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
87.5
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
67.31
 -1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
83.49
 0.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
1
84.46
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
1
88.35
 -0.97% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
77.78
 0.0% adam-cli/src/main/scala/org/bdgenomics/adam/cli/View.scala
2
94.38
 -1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
2
63.64
 5.19% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
3
59.9
 3.61% adam-cli/src/main/scala/org/bdgenomics/adam/cli/TransformAlignments.scala
3
80.0
 -20.0% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
4
88.35
 -1.85% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
9
89.81
 0.08% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
13
72.86
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/rdd/contig/NucleotideContigFragmentRDD.scala
56
70.61
 4.68% adam-core/src/main/scala/org/bdgenomics/adam/rdd/GenomicRDD.scala
63
84.08
 4.98% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
Jobs
ID Job ID Ran Files Coverage
1 2053.1 251
82.63
2 2053.2 251
82.63
3 2053.3 251
82.61
4 2053.4 251
82.63
5 2053.5 251
82.61
6 2053.6 251
82.61
7 2053.7 251
82.63
8 2053.8 251
82.61
Source Files on build 2053
Coverage ∆ File Lines Relevant Covered Missed Hits/Line