bigdatagenomics / adam / 2026
84%
master: %

LAST BUILD BRANCH: cli-partition
DEFAULT BRANCH: master
Ran
Jobs 8
Files 150
Run time 1min
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2026

Pull #1540

jenkins

web-flow 
<a href="https://github.com/bigdatagenomics/adam/commit/<a class=hub.com/bigdatagenomics/adam/commit/fe28f39b165466a6446c61c372fc089bb63a7e59">fe28f39b1<a href="https://github.com/bigdatagenomics/adam/commit/fe28f39b165466a6446c61c372fc089bb63a7e59">">Merge </a><a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/<a class="double-link" href="https://github.com/bigdatagenomics/adam/commit/a50c351008ea27a527cbceac3a021f143d16e015">a50c35100</a>">a50c35100</a><a href="https://github.com/bigdatagenomics/adam/commit/fe28f39b165466a6446c61c372fc089bb63a7e59"> into fe1cba217">fe1cba217</a>
Pull Request #1540: Support locus predicate in Transform

11 of 11 new or added lines in 1 file covered. (100.0%)

5257 of 6356 relevant lines covered (82.71%)

6.61 hits per line

New Missed Lines in Diff

Lines Coverage ∆ File
1
89.87
 0.15% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala

Uncovered Existing Lines

Lines Coverage ∆ File
1
90.38
 -1.92% adam-core/src/main/scala/org/bdgenomics/adam/rdd/variant/VariantContextRDD.scala
1
82.76
 -3.45% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/ReferencePositionPair.scala
1
59.46
 -2.7% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/MDTagging.scala
1
86.96
 -4.35% adam-core/src/main/scala/org/bdgenomics/adam/rdd/fragment/Tab6InFormatter.scala
1
64.94
 6.49% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/Features.scala
1
89.87
 0.15% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferenceRegion.scala
1
67.31
 -1.92% adam-core/src/main/scala/org/bdgenomics/adam/models/NonoverlappingRegions.scala
1
91.67
 4.17% adam-core/src/main/scala/org/bdgenomics/adam/models/ReferencePosition.scala
1
93.75
 -0.52% adam-core/src/main/scala/org/bdgenomics/adam/models/MdTag.scala
1
94.19
 0.0% adam-core/src/main/scala/org/bdgenomics/adam/converters/SAMRecordConverter.scala
1
96.63
 1.12% adam-core/src/main/scala/org/bdgenomics/adam/converters/TranscriptEffectConverter.scala
1
66.67
 -3.03% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Reads2Coverage.scala
2
89.22
 -0.98% adam-core/src/main/scala/org/bdgenomics/adam/models/SequenceDictionary.scala
2
83.08
 3.98% adam-core/src/main/scala/org/bdgenomics/adam/rdd/ADAMContext.scala
2
87.38
 -1.94% adam-core/src/main/scala/org/bdgenomics/adam/util/TwoBitFile.scala
2
84.06
 -0.4% adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
2
86.67
 -13.33% adam-core/src/main/scala/org/bdgenomics/adam/models/SAMFileHeaderWritable.scala
3
80.73
 -1.83% adam-core/src/main/scala/org/bdgenomics/adam/rdd/feature/FeatureParser.scala
49
60.91
 3.54% adam-cli/src/main/scala/org/bdgenomics/adam/cli/Transform.scala
Jobs
ID Job ID Ran Files Coverage
1 2026.1 251
82.52
2 2026.2 251
82.5
3 2026.3 251
82.63
4 2026.4 251
82.5
5 2026.5 251
82.52
6 2026.6 251
82.65
7 2026.7 251
82.63
8 2026.8 251
82.65
Source Files on build 2026
Coverage ∆ File Lines Relevant Covered Missed Hits/Line